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ENVIRONMENT, WELL-BEING, AND BEHAVIOR |





* INRA, AFSSA, ENVA, UPVM, UMR 956 Biologie Moléculaire et Immunologie Parasitaires et Fongiques, École Nationale Vétérinaire dAlfort, 94700 Maisons-Alfort, France;
Cabinet Vétérinaire Bailleul-Séguin, 45270 Quiers sur Bézonde, France; and
Service de Parasitologie, Faculté de Médecine de Créteil, Hôpital Henri Mondor (AP-HP), 94010 Créteil, France
1 Corresponding author: jguillot{at}vet-alfort.fr
| ABSTRACT |
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Key Words: fungi contamination Aspergillus Candida environment
| INTRODUCTION |
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The present study was aimed at describing the relative abundances of fungal species and their concentrations in a facility where turkeys were housed. A 16-wk surveillance program was undertaken for the detection of fungal species in the air, food, and litter. The incubation temperature of 40°C was selected to isolate only thermophilic fungal species (especially Aspergillus spp. and C. albicans) that are potentially pathogenic for birds. The Aspergillus fumigatus isolates collected during the study period were genotyped and compared by use of 2 polymorphic microsatellite markers (PMM; Bart-Delabesse et al., 1998).
| MATERIALS AND METHODS |
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Sampling and Fungal Isolation
Over the 16-wk period of breeding, the environmental contamination by thermophilic fungal species was assessed in the confinement house. Every week, serial air samples of 100 L were made with a bioimpactor (Air Strategie Bioimpactor 100-08 Laboratoire de Chimie et Biologie, Lasalle, France) loaded with Sabouraud-chloramphenicol (SC; 0.5%, Sigma, Saint-Quentin Fallavier, France) dextrose agar plates. Air samples were taken from 8 locations inside the confinement house (Figure 1
). The air sampler was placed 1 m from the soil. Samples of litter and food were also collected weekly. One gram of each litter or food sample was introduced in a tube containing 10 mL of sterile water. After vigorous shaking, 1 mL was inoculated onto a SC dextrose agar plate. Culture plates were incubated at 40°C for 4 d and examined daily. The temperature of 40°C was chosen to select the growth of the thermophilic species, which may behave as opportunistic pathogens for birds. Molds were identified by their macroscopic and microscopic appearance after lactophenol cotton blue staining (de Hoog et al., 2000). Yeasts were subcultured and identified with the Api32C system (BioMerieux, Marcy lEtoile France). For each positive sample, fungal contamination was estimated by counting the number of colony-forming units (per m3 for air samples and per g for litter and feed samples).
During the 16-wk study period, records on daily mortality were kept. Records of carcass condemnation at the slaughterhouse were also analyzed.
Microsatellite Typing of A. fumigatus isolates
Representative isolates of A. fumigatus were subcultured on SC slants for 4 d at 37°C. The conidia suspension obtained from each subculture was frozen in liquid N and centrifuged. The DNA extraction from 180 µL of supernatant was performed by a Qiagen kit (DNeasy Tissue kit, Qiagen, Courtaboeuf, France). Two sets of primers specific for microsatellites C and D were used to amplify each isolate DNA (Bart-Delabesse et al., 1998). One primer of each set was labeled with a fluorescent dye, either 6-carboxyfluorescein or 4,7,2',4',5',7'-hexachloro-6-carboxyfluorescein (Oligo-Express, Paris, France), for detection with an automated DNA sequencer. Polymerase chain reaction amplifications were performed in a 20-µL volume containing 1.5 mM MgCl2, 10 mM Tris-HCl (pH 9.0), and 50 mM KCl; forward and reverse primers at concentrations of 100 nM each; the deoxynucleoside triphosphates at concentrations of 100 µM each; and 0.5 U of Taq DNA polymerase (Pharmacia Biotech, Orsay, France), 5% (vol/vol) dimethyl sulfoxide, and 50 ng of DNA template. Amplification was carried out in a Perkin-Elmer Cetus system 480 thermocycler (Perkin-Elmer, Courtaboeuf, France) with denaturation for 10 min at 95°C, 30 cycles of 20 s at 95°C, 20 s at 55°C, and 20 s at 72°C and a final extension step at 72°C for 5 min. The PCR products were diluted 1:10 in water, and 1 µL of each was run on a 36-cm long acrylamide urea gel (4.25% polyacrylamide, 8.3 M urea, and 1 x Tris-borate-EDTA for 2 h at 3,000V and 51°C). The N,N,N,N'tetramethyl-6-carboxyrhodamine-labeled GeneScan size standard (Perkin-Elmer) was loaded into each well, along with the PCR products. Signals were read with an automatic sequencer (ABI377, Applied Biosystems, Courtaboeuf, France), and the data were stored and analyzed with GeneScan Software (Version 2.0.2, Perkin-Elmer) by the local Southern sizing method.
| RESULTS |
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The results of the surveillance program for the detection of fungal conidia in the air inside the confinement house are shown in Figure 2
. During the first 9 wk, air samples yielded the growth of many A. flavus colonies (from 8.6 to 150.0 cfu/m3; mean 72.9 cfu/m3). Samples were also positive for A. fumigatus (32 out of 56) or for another fungal species (47 out of 56), but at a low level, from 1.3 to 40.0 cfu/m3 for A. fumigatus and from 10 to 62.5 cfu/m3 for other fungal species. Seven weeks later, only 3 air samples were positive for A. flavus, with a very low level from 1.3 to 3.8 cfu/m3. Concomitantly, air samples were positive for A. fumigatus and for other fungal species with a level from 2.5 to 27.5 cfu/m3 and from 1.3 to 28.8 cfu/m3, respectively.
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Colonies of C. albicans were first detected at wk 4 from litter samples and at wk 7 from poultry feed. Densities of C. albicans remained very high in litter samples (63.2 cfu/g), even after new litter was added at wk 10.
A. fumigatus genotyping
Globally, 198 A. fumigatus were typed by PMM analysis. This led to the resolution of 73 distinct genotypes. Each of these genotypes was characterized by a specific combination of allele size at microsatellite loci C and D. More than half (42 out of 73, 57.5%) of these genotypes were detected only once. Figure 3
indicates the allele size distributions of A. fumigatus isolates at the 2 microsatellite loci C and D. Polymorphic microsatellite marker D was confirmed to be highly polymorphic, with 32 different alleles. Eleven of these alleles (D60, D64, D66, D68, D78, D80, D82, D86, D124, D140, D152) were considered as new ones, because they were not described in the initial study of Bart-Delabesse et al. (1998). Conversely, only 2 alleles initially described by Bart-Delabesse et al. (1998) were not detected in the present study. The use of PMM C yielded 11 alleles. Only 2 of these alleles were considered as new ones (C185 and C189). One allele (C165) described by Bart-Delabesse et al. (1998) was not detected in the present study. For a specific PMM, only 1 band was observed after amplification. This finding confirmed that there was no mixture of several isolates in our study. Indeed, if several isolates had been accidentally mixed, several alleles should have been observed, because A. fumigatus is haploid.
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Lesions of aspergillosis were detected in only 2 birds whose carcasses were condemned at slaughter inspection (Lair-Fulleringer et al., 2003). Macroscopic lesions were observed in the abdominal air sac, lungs, and kidneys. Aspergillus fumigatus isolates collected from the lesions were proved to represent a unique genotype (C173D112 for the first turkey and C169D102 for the second one). Genotype C169D102 was detected in air samples at wk 13 and 14 (3 and 2 wk before slaughtering) and in litter samples of wk 14. Genotype C173D112 was never detected in air, litter, and feed samples during the study.
| DISCUSSION |
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The definition of acceptable threshold levels is required to correlate outbreaks of avian mycosis with the use of contaminated litter material or feed. This would also allow defects in facility ventilation to be identified and specific cleaning procedures to be monitored. In hospitals, many studies have attempted to evaluate the importance of fungal aerobiology in relation to the acquisition of invasive fungal infections by immunocompromized patients. Most authors recommend Aspergillus air counts of <5 cfu/m3 in protective isolation suites (Morris et al., 2000; Alberti et al., 2001). The present investigation demonstrated a constant fungal contamination in the facility throughout the 16-wk study period. However, mold counts were generally low (<30 cfu/m3 and <1.5 cfu/g), except for A. flavus in the first weeks of the surveillance program (up to 150 cfu/m3). These values are within the ranges reported in similar investigations concerning the global fungal contamination of indoor air of dwellings where humans lived or worked: 3 to 6000, with an average of 654 cfu/m3 (Kozak et al., 1980); 165 to 850 cfu/m3 (Nevalainen et al., 1991); 100 to 2,300 cfu/m3 in "moldy" dwellings (Nevalainen et al., 1991); and 500 to 1,000 cfu/m3, the current standard (Miller et al., 1988). The amount of viable and culturable microscopic fungi in indoor air is very variable. The liberation of the spores into the air depends on the physiological properties of individual species of microscopic fungi colonizing the litter or the feed. Aspergillus species form small xerophilic spores (2 to 3 µm in diameter for A. fumigatus) in high amounts, making very fragile chains. The formation and emission of these spores from their sources depend on different parameters, including environmental temperature, moisture, and air disturbance within the facility. The most striking result of the present study was the predominance of A. flavus spores in the first weeks of brooding. The high temperature maintained inside the confinement house for the chicks may account for this result. The temperature was very high (34°C) when the 1-d-old chicks were introduced in the facility. It regularly decreased to 20°C (at wk 7). The species A. flavus has a worldwide distribution but is more frequently isolated in tropical or subtropical areas (Domsch et al., 1993) where it may constitute the first fungal contaminant of the air. Its growth is optimal in low soil moisture and when temperatures are from 36 to 38°C.
Another interesting finding is the isolation of C. albicans in many environmental samples (68.7%), including air samples from wk 4 to the end of the study. The yeast C. albicans belongs to the normal digestive flora of birds. In the case of confinement structures densely stocked with birds, the environmental contamination by dropping is massive. In the present study, densities of C. albicans remained very high in litter samples (63.2 cfu/g), even after new litter was added at wk 10.
Potential Health Problems Related to Fungal Contamination
Out of the different fungal species that were regularly isolated during the surveillance program, 3 are considered major opportunistic pathogens for turkeys: A. fumigatus, C. albicans, and, to a lesser extent, A. flavus. However, no case of clinical aspergillosis or candidosis was detected in the facility, and only 2 carcasses were condemned at slaughter inspection. Low levels of environmental contamination by A. fumigatus may account for this situation. However, the correlation between contamination and the occurrence of clinical cases of avian aspergillosis has been suspected but not clearly demonstrated. In a case report following an outbreak of aspergillosis in a flock of turkeys, high Aspergillus counts (>106 cfu/g) were reported from wood shavings that were used as litter (Dyar et al., 1984). These counts decreased after the litter was treated with CuSO4, and the outbreak was controlled. In care units, where immunocompromised humans are hospitalized, there is no consensus on the spore density at which the risk of aspergillosis is increased. Recently, 2 studies in hematology and oncology wards found no correlation between the density of airborne Aspergillus and the occurrence of aspergillosis (Hospenthal et al., 1998; Leenders et al., 1999).
Although A. fumigatus is the most common etiologic agent of Aspergillus infection, it is not the only pathogenic species in the genus. Aspergillus flavus can also cause avian infections (Knudtson and Meinecke, 1972; Ghazikhanian, 1989; Barton et al., 1992; Richard, 1997). In the present study, no case of A. flavus infection was observed, even during the few weeks when the environmental contamination with this species was massive. However, the potential health problems in turkeys should not be underestimated, because A. flavus is a toxinogenic species. The presence of mycotoxins inside as well as on the surface of A. flavus spores has been demonstrated. Furthermore, it has been found that the potency of the respiratory route is higher than the alimentary route. The dose of mycotoxin required to cause particular effects is 1 order of magnitude less when administered by the respiratory tract than by ingestion (Hendry and Cole, 1993).
During the present investigation, the thermophilic species Ochroconis gallopava (Dactylaria gallopava) was not isolated. This species tends to grow in warm environments and is typically found in soil and decaying vegetation. Ochroconis gallopava has been isolated from fowl broiler-house litter in the United States (Randall et al., 1981) and is incriminated as an agent of epidemic encephalitis in birds. However, no case of avian Ochroconis infection has ever been described in Europe.
A. fumigatus genotyping
The analysis of PMM from 198 A. fumigatus isolates confirmed the very high polymorphism of fungal populations in the environment. Most of the 73 distinct genotypes were detected only once. Not surprisingly, the extent of genetic diversity seemed to be the same among isolates from the air, the feed, or the litter material. Differences could not be detected among sampling sites, either. Similar results were reported when the genetic diversity of A. fumigatus isolates from a hospital environment were investigated with the same molecular technique (Bart-Delabesse et al., 1998, 1999). When clinical and environmental isolates were compared, no particular A. fumigatus genotype could be associated with virulence in humans (Bart-Delabesse et al., 1998, 1999) and birds (Lair-Fulleringer et al., 2003). The absence of particular virulent A. fumigatus isolates was confirmed by Peden and Rhoades (1992), who inoculated isolates from diverse origins (environmental, mammalian, avian) in air sacs of turkeys.
Several studies have already reported the application of the PMM technique for the genotyping of C. albicans (Field et al., 1996; Bretagne et al., 1997; Botterel et al., 2001). The performance of this typing system has been evaluated on collection and clinical strains (from human cases of candidosis). Unfortunately, we did not have the opportunity to use the PMM technique for the yeast isolates that were collected during the present study. The population structure of C. albicans within a group of birds has never been described.
Received for publication October 27, 2005. Accepted for publication July 4, 2006.
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